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MolNFT v1 · #156562 · protein

Crystal structure of CKIR2.2 force open mutant in complex with PI(4, 5)P2

6M84 · ATP-sensitive inward rectifier potassium channel 12: “Crystal structure of CKIR2.2 force open mutant in complex with PI(4, 5)P2”. X-ray diffraction, 2 ligands (PIO, K), 3 pockets (best druggability 0.35). MolNFT v1 #156562 on…

PDB
6M84
Type
protein
Length
326 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
ATP-sensitive inward rectifier potassium channel 12
UniProt
F1NHE9
Ligands
PIO, K
Pockets
3 · best druggability 0.35

Structure

x-ray diffraction · 1 distinct chain · 36% helix, 27% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AATP-sensitive inward rectifier potassium channel 12protein32636% helix, 27% strandF1NHE9

Ligands and binding sites

  • PIO · [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2, 3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate · ligand · chains A
  • K · Potassium ion · metal · 6 copies · chains A
  • LMT · Dodecyl-beta-D-maltoside · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
1800.350.7618empty
2650.290.7424empty
3510.250.7315empty

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

  • 6M84 · Crystal structure of cKir2.2 force open mutant in complex with PI(4,5)P2 · the same entry in another collection · chain A against A, TM-score 1.00
  • F1NHE9 · AlphaFold monomer V2.0 prediction for ATP-sensitive inward rectifier potassium channel 12… · a predicted model of the same protein · chain A against A, TM-score 0.99

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