MolNFT v1 · #155586 · protein
Crystal structure of aatps apo
6LCC: “Crystal structure of aatps apo”. X-ray diffraction, 8 pockets (best druggability 0.77). MolNFT v1 #155586 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6LCC
- Type
- protein
- Length
- 749 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Aatps
- Pockets
- 8 · best druggability 0.77
Structure
x-ray diffraction · 2 distinct chains · 62% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Aatps | protein | 375 | 62% helix, 3% strand | — |
| B | Aatps | protein | 374 | 63% helix, 3% strand | — |
Pockets
8 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1101 | 0.77 | 0.79 | 76 | empty |
| 2 | 835 | 0.74 | 0.78 | 52 | empty |
| 3 | 102 | 0.43 | 0.78 | 21 | empty |
| 4 | 126 | 0.41 | 0.75 | 19 | empty |
| 5 | 70 | 0.36 | 0.77 | 13 | empty |
Interfaces
1 interface between chains.
- A–B · 673 Ų buried · 9 hydrogen bonds · protein-protein
Compared structures
- 6LCC · Crystal structure of AaTPS apo · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6LCC · PDBe 6LCC
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