MolNFT v1 · #155461 · protein
Human ppargamma ligand binding domain complexed with butyrolactone 1
6L89: “Human ppargamma ligand binding domain complexed with butyrolactone 1”. X-ray diffraction, 1 ligand (E7C). MolNFT v1 #155461 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6L89
- Type
- protein
- Length
- 514 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P37231
- Ligands
- E7C
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 262 | — | P37231 |
| B | — | protein | 252 | — | P37231 |
Ligands and binding sites
- E7C · methyl (2R)-3-(4-hydroxyphenyl)-2-[[3-(3-methylbut-2-enyl)-4-oxidanyl-phenyl]methyl]-4-oxidanyl-5-oxidanylidene-furan-2-carboxylate · ligand · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6L89 · Human PPARgamma ligand binding domain complexed with Butyrolactone 1 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P37231
- Elsewhere: RCSB PDB 6L89 · PDBe 6L89 · UniProt P37231
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