MolNFT v1 · #155451 · protein

Crystal structure of CET1 from trypanosoma cruzi in complex with #466 ligand.

6L7Y · MRNA_TRIPASE domain-containing protein: “Crystal structure of CET1 from trypanosoma cruzi in complex with #466 ligand.”. X-ray diffraction, 2 ligands (JJY, SO4), 1 pocket (best druggability 0.56). MolNFT v1 #155451 on GenesisL1: 3D…

PDB: 6L7Y
Type: protein
Length: 203 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: MRNA_TRIPASE domain-containing protein
UniProt: Q4E2I1
Ligands: JJY, SO4
Pockets: 1 · best druggability 0.56

Structure

x-ray diffraction · 1 distinct chain · 28% helix, 45% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	MRNA_TRIPASE domain-containing protein	protein	203	28% helix, 45% strand	Q4E2I1

Ligands and binding sites

JJY · 3,4,6,7-tetrahydroacridine-1,8(2H,5H)-dione · ligand · chains A
SO4 · Sulfate ion · ion · 4 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	385	0.56	0.74	42	SO4

Compared structures

6L7Y · Crystal structure of Cet1 from Trypanosoma cruzi in complex with #466 ligand. · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q4E2I1
Elsewhere: RCSB PDB 6L7Y · PDBe 6L7Y · UniProt Q4E2I1

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