MolNFT v1 · #155350 · protein

Crystal structure of enterovirus D68 rdrp

6L4R: “Crystal structure of enterovirus D68 rdrp”. X-ray diffraction, 4 pockets (best druggability 0.62). MolNFT v1 #155350 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6L4R
Type: protein
Length: 455 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Rdrp
EC: 2.7.7.48
UniProt: I6TFG7
Pockets: 4 · best druggability 0.62

Structure

x-ray diffraction · 1 distinct chain · 42% helix, 16% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Rdrp (EC 2.7.7.48)	protein	455	42% helix, 16% strand	I6TFG7

Pockets

4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	548	0.62	0.75	57	empty
2	406	0.61	0.76	49	empty
3	114	0.42	0.76	18	empty
4	81	0.31	0.73	18	empty

Compared structures

6L4R · Crystal structure of Enterovirus D68 RdRp · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt I6TFG7
Elsewhere: RCSB PDB 6L4R · PDBe 6L4R · UniProt I6TFG7

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