MolNFT v1 · #155087 · protein

A crystal structure of ospa mutant

6KWJ · Outer surface protein a: “A crystal structure of ospa mutant”. X-ray diffraction, 3 pockets (best druggability 0.38). MolNFT v1 #155087 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6KWJ
Type: protein
Length: 239 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Outer surface protein a
UniProt: P0CL66
Pockets: 3 · best druggability 0.38

Structure

x-ray diffraction · 1 distinct chain · 4% helix, 56% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
B	Outer surface protein a	protein	239	4% helix, 56% strand	P0CL66

Pockets

3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	110	0.38	0.75	25	empty
2	80	0.36	0.76	24	empty
3	66	0.33	0.76	18	empty

Compared structures

6KWJ · A Crystal Structure of OspA mutant · the same entry in another collection · chain B against B, TM-score 1.00
P0CL66 · AlphaFold monomer V2.0 prediction for outer surface protein a (P0CL66) · a predicted model of the same protein · chain B against A, TM-score 0.59

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0CL66
Elsewhere: RCSB PDB 6KWJ · PDBe 6KWJ · UniProt P0CL66

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