MolNFT v1 · #155011 · protein
Crystal structure of gibberellin 2-OXIDASE3 (GA2OX3)IN rice
6KU3: “Crystal structure of gibberellin 2-OXIDASE3 (GA2OX3)IN rice”. X-ray diffraction, 3 ligands (GA4, AKG, SO4). MolNFT v1 #155011 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6KU3
- Type
- protein
- Length
- 1,262 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q8S0S6
- Ligands
- GA4, AKG, SO4
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 317 | — | Q8S0S6 |
| B | — | protein | 318 | — | Q8S0S6 |
| C | — | protein | 317 | — | Q8S0S6 |
| D | — | protein | 310 | — | Q8S0S6 |
Ligands and binding sites
- GA4 · Gibberellin A4 · ligand · 6 copies · chains A, D, B, C
- AKG · 2-oxoglutaric acid · ligand · 4 copies · chains A, B, C, D
- SO4 · Sulfate ion · ion · 6 copies · chains A, B, C, D
- GOL · Glycerol · additive · 10 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6KU3 · Crystal structure of gibberellin 2-oxidase3 (GA2ox3)in rice · the same entry in another collection · chain D against D, TM-score 1.00
- Q8S0S6 · AlphaFold monomer V2.0 prediction for gibberellin 2-beta-dioxygenase 3 (Q8S0S6) · a predicted model of the same protein · chain D against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8S0S6
- Elsewhere: RCSB PDB 6KU3 · PDBe 6KU3 · UniProt Q8S0S6
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