MolNFT v1 · #154901 · protein
A long chain secondary alcohol dehydrogenase of micrococcus luteus
6KQB · 3-hydroxybutyryl-CoA dehydrogenase: “A long chain secondary alcohol dehydrogenase of micrococcus luteus”. X-ray diffraction, 4 pockets (best druggability 0.70). MolNFT v1 #154901 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 6KQB
- Type
- protein
- Length
- 620 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 3-hydroxybutyryl-CoA dehydrogenase
- UniProt
- A0A085E1L0
- Pockets
- 4 · best druggability 0.70
Structure
x-ray diffraction · 1 distinct chain · 50% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | 3-hydroxybutyryl-CoA dehydrogenase | protein | 310 | 50% helix, 15% strand | A0A085E1L0 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 592 | 0.70 | 0.79 | 65 | empty |
| 2 | 522 | 0.69 | 0.79 | 59 | empty |
| 3 | 138 | 0.47 | 0.78 | 27 | empty |
| 4 | 71 | 0.38 | 0.78 | 14 | empty |
Interfaces
1 interface between chains.
- A–B · 1923 Ų buried · 19 hydrogen bonds · protein-protein
Compared structures
- 6KQB · A long chain secondary alcohol dehydrogenase of Micrococcus luteus · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A085E1L0
- Elsewhere: RCSB PDB 6KQB · PDBe 6KQB · UniProt A0A085E1L0
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