MolNFT v1 · #15487 · protein

Copper bound to the multicopper oxidase cueo

1N68 · Blue copper oxidase cueo: “Copper bound to the multicopper oxidase cueo”. X-ray diffraction, 2 ligands (C2C, CU), 5 pockets (best druggability 0.45). MolNFT v1 #15487 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1N68
Type: protein
Length: 464 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Blue copper oxidase cueo
UniProt: P36649
Ligands: C2C, CU
Pockets: 5 · best druggability 0.45

Structure

x-ray diffraction · 1 distinct chain · 12% helix, 42% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Blue copper oxidase cueo	protein	464	12% helix, 42% strand	P36649

Ligands and binding sites

C2C · Cu-cl-Cu linkage · ligand · chains A
CU · Copper (II) ion · metal · 4 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	58	0.45	0.84	21	empty
2	123	0.42	0.76	22	empty
3	78	0.34	0.75	19	empty
4	58	0.34	0.77	13	empty
5	53	0.32	0.77	16	empty

Compared structures

1N68 · Copper bound to the Multicopper Oxidase CueO · the same entry in another collection · chain A against A, TM-score 1.00
P36649 · AlphaFold monomer V2.0 prediction for blue copper oxidase cueo (P36649) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P36649
Elsewhere: RCSB PDB 1N68 · PDBe 1N68 · UniProt P36649

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