MolNFT v1 · #154774 · protein
Crystal structure of the type III effector xopai from xanthomonas axonopodis pv. citri in space group P43212
6KLY: “Crystal structure of the type III effector xopai from xanthomonas axonopodis pv. citri in space group P43212”. X-ray diffraction, 2 pockets (best druggability 0.55). MolNFT v1 #154774 on GenesisL1: 3D structure, binding sites and…
- PDB
- 6KLY
- Type
- protein
- Length
- 237 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Type III effector xopai
- UniProt
- Q8PHM1
- Pockets
- 2 · best druggability 0.55
Structure
x-ray diffraction · 1 distinct chain · 44% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Type III effector xopai | protein | 237 | 44% helix, 21% strand | Q8PHM1 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 203 | 0.55 | 0.79 | 20 | empty |
| 2 | 122 | 0.45 | 0.78 | 24 | empty |
Compared structures
- 6KLY · Crystal structure of the type III effector XopAI from Xanthomonas axonopodis pv. citri in… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8PHM1
- Elsewhere: RCSB PDB 6KLY · PDBe 6KLY · UniProt Q8PHM1
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