MolNFT v1 · #15472 · protein

Crystal structure of a monooxygenase from the gene actva-ORF6 of streptomyces coelicolor in complex with the ligand oxidized acetyl dithranol

1N5T · Actva-ORF6 monooxygenase: “Crystal structure of a monooxygenase from the gene actva-ORF6 of streptomyces coelicolor in complex with the…”. X-ray diffraction, 1 ligand (OAL), 3 pockets (best druggability 0.69). MolNFT v1 #15472 on…

PDB: 1N5T
Type: protein
Length: 224 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Actva-ORF6 monooxygenase
UniProt: Q53908
Ligands: OAL
Pockets: 3 · best druggability 0.69

Structure

x-ray diffraction · 1 distinct chain · 32% helix, 35% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Actva-ORF6 monooxygenase	protein	112	32% helix, 35% strand	Q53908

Ligands and binding sites

OAL · (1,8-dihydroxy-9,10-dioxo-9,10-dihydro-anthracen-2-yl)-acetic acid · ligand · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	123	0.69	0.90	24	OAL
2	168	0.58	0.81	25	empty
3	94	0.40	0.77	19	empty

Interfaces

1 interface between chains.

A–B · 1633 Å² buried · 31 hydrogen bonds · protein-protein

Compared structures

1N5T · Crystal structure of a Monooxygenase from the gene ActVA-Orf6 of Streptomyces coelicolor… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q53908
Elsewhere: RCSB PDB 1N5T · PDBe 1N5T · UniProt Q53908

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