MolNFT v1 · #154643 · protein + DNA
The crystal structure of ASFVAP:AG
6KHY: “The crystal structure of ASFVAP:AG”. X-ray diffraction, 1 ligand (ZN). MolNFT v1 #154643 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6KHY
- Type
- protein + DNA
- Length
- 1,294 residues
- Chains
- 10
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0C9C6
- Ligands
- ZN
Structure
x-ray diffraction · 7 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C, D | — | protein | 299 | — | P0C9C6 |
| E | — | dna | 17 | — | — |
| F | — | dna | 16 | — | — |
| G | — | dna | 16 | — | — |
| H | — | dna | 16 | — | — |
| I | — | dna | 16 | — | — |
| J | — | dna | 17 | — | — |
Ligands and binding sites
- ZN · Zinc ion · metal · 12 copies · chains A, B, C, E, D
- MES · 2-(N-morpholino)-ethanesulfonic acid · additive · 4 copies · chains A, F, B, G, H, C, E, D, I, J
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6KHY · The crystal structure of AsfvAP:AG · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0C9C6
- Elsewhere: RCSB PDB 6KHY · PDBe 6KHY · UniProt P0C9C6
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