MolNFT v1 · #15460 · protein
Solution structure of the cathelin-like domain of protegrins (the R87- P88 and D118-P119 amide bonds are in the cis conformation)
1N5H: “Solution structure of the cathelin-like domain of protegrins (the R87- P88 and D118-P119 amide bonds are in…”. Solution nmr, 1 pocket (best druggability 0.54). MolNFT v1 #15460 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 1N5H
- Type
- protein
- Length
- 105 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protegrins
- UniProt
- P49933
- Pockets
- 1 · best druggability 0.54
Structure
solution nmr · 1 distinct chain · 14% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protegrins | protein | 105 | 14% helix, 35% strand | P49933 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 67 | 0.54 | 0.87 | 26 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 1N5H · Solution structure of the cathelin-like domain of protegrins (the R87-P88 and D118-P119… · the same entry in another collection · chain A against A, TM-score 1.00
- P49933 · AlphaFold monomer V2.0 prediction for protegrin-4 (P49933) · a predicted model of the same protein · chain A against A, TM-score 0.84
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P49933
- Elsewhere: RCSB PDB 1N5H · PDBe 1N5H · UniProt P49933
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