MolNFT v1 · #15457 · DNA
Crystal structure analysis of the B-DNA dodecamer CGCGAATT(ETHENOC)GCG
1N5C · 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(EDC)P*GP*CP*G)-3': “Crystal structure analysis of the B-DNA dodecamer CGCGAATT(ETHENOC)GCG”. X-ray diffraction, 1 ligand (NA). MolNFT v1 #15457 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 1N5C
- Type
- DNA
- Length
- 12 nucleotides
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(EDC)P*GP*CP*G)-3'
- Ligands
- NA
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(EDC)P*GP*CP*G)-3' | dna | 12 | — | — |
Ligands and binding sites
- NA · Sodium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 modified (nucleotide modification).
Compared structures
- 1N5C · Crystal Structure Analysis of the B-DNA Dodecamer CGCGAATT(ethenoC)GCG · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1N5C · PDBe 1N5C
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