MolNFT v1 · #1545 · protein

NMR structure of human mip-1A D26A, 10 structures

1B50: “NMR structure of human mip-1A D26A, 10 structures”. Solution nmr, 1 pocket (best druggability 0.36). MolNFT v1 #1545 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1B50
Type: protein
Length: 138 residues
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Mip-1A
UniProt: P10147
Pockets: 1 · best druggability 0.36

Structure

solution nmr · 1 distinct chain · 9% helix, 9% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Mip-1A	protein	69	9% helix, 9% strand	P10147

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	111	0.36	0.73	27	empty

Interfaces

1 interface between chains.

A–B · 507 Å² buried · 3 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 4 disulfide (disulfide).

Compared structures

1B50 · NMR structure of human mip-1A D26A, 10 structures · the same entry in another collection · chain A against A, TM-score 1.00
P10147 · AlphaFold monomer V2.0 prediction for C-C motif chemokine 3 (P10147) · a predicted model of the same protein · chain A against A, TM-score 0.69

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P10147
Elsewhere: RCSB PDB 1B50 · PDBe 1B50 · UniProt P10147

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