MolNFT v1 · #154283 · protein
The crystal structure of cytidine deaminase from klebsiella pneumoniae
6K63: “The crystal structure of cytidine deaminase from klebsiella pneumoniae”. X-ray diffraction, 1 ligand (ZN). MolNFT v1 #154283 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6K63
- Type
- protein
- Length
- 1,169 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A6TBN1
- Ligands
- ZN
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 294 | — | A6TBN1 |
| B, C | — | protein | 292 | — | A6TBN1 |
| D | — | protein | 291 | — | A6TBN1 |
Ligands and binding sites
- ZN · Zinc ion · metal · 4 copies · chains A, B, C, D
- DIO · 1,4-diethylene dioxide · additive · 12 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6K63 · The crystal structure of cytidine deaminase from Klebsiella pneumoniae · the same entry in another collection · chain D against D, TM-score 1.00
- A6TBN1 · AlphaFold monomer V2.0 prediction for cytidine deaminase (A6TBN1) · a predicted model of the same protein · chain B against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A6TBN1
- Elsewhere: RCSB PDB 6K63 · PDBe 6K63 · UniProt A6TBN1
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