MolNFT v1 · #154219 · DNA
G-quadruplex complex with linear dinucleotide D(AG)
6K3X · DNA (5'- D(*TP*TP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*…: “G-quadruplex complex with linear dinucleotide D(AG)”. Solution nmr. MolNFT v1 #154219 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6K3X
- Type
- DNA
- Length
- 19 nucleotides
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA (5'- D(*TP*TP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*T)-3'); DNA (5'-D(*AP*G)-3')
Structure
solution nmr · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA (5'- D(*TP*TP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*TP*GP*GP*GP*T)-3') | dna | 17 | — | — |
| B | DNA (5'-D(*AP*G)-3') | dna | 2 | — | — |
Interfaces
1 interface between chains.
- A–B · 298 Ų buried · 14 hydrogen bonds · nucleic-nucleic
Compared structures
- 6K3X · G-quadruplex complex with linear dinucleotide d(AG) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6K3X · PDBe 6K3X
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