MolNFT v1 · #154215 · protein
Application of anti-helix antibodies in protein structure determination (8189-3LRH)
6K3M · Spa IgG-binding domain PROTEIN,PROTEIN a: “Application of anti-helix antibodies in protein structure determination (8189-3LRH)”. X-ray diffraction, 1 pocket (best druggability 0.36). MolNFT v1 #154215 on GenesisL1: 3D structure…
- PDB
- 6K3M
- Type
- protein
- Length
- 170 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Spa IgG-binding domain PROTEIN,PROTEIN a; 3LRH intrabody
- UniProt
- D7RHB0
- Pockets
- 1 · best druggability 0.36
Structure
x-ray diffraction · 2 distinct chains · 32% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| H | Spa IgG-binding domain PROTEIN,PROTEIN a | protein | 61 | 85% helix, 0% strand | D7RHB0 |
| A | 3LRH intrabody | protein | 109 | 3% helix, 50% strand | — |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 60 | 0.36 | 0.78 | 14 | empty |
Interfaces
1 interface between chains.
- H–A · 638 Ų buried · 2 hydrogen bonds · protein-protein
Compared structures
- 6K3M · Application of anti-helix antibodies in protein structure determination (8189-3LRH) · the same entry in another collection · chain H against H, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D7RHB0
- Elsewhere: RCSB PDB 6K3M · PDBe 6K3M · UniProt D7RHB0
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