MolNFT v1 · #154163 · protein
Pyrophosphatase from acinetobacter baumannii
6K21 · Inorganic pyrophosphatase: “Pyrophosphatase from acinetobacter baumannii”. X-ray diffraction, 2 ligands (MG, NA), 2 pockets (best druggability 0.55). MolNFT v1 #154163 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6K21
- Type
- protein
- Length
- 173 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Inorganic pyrophosphatase
- EC
- 3.6.1.1
- UniProt
- N9S5K0
- Ligands
- MG, NA
- Pockets
- 2 · best druggability 0.55
Structure
x-ray diffraction · 1 distinct chain · 21% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Inorganic pyrophosphatase (EC 3.6.1.1) | protein | 173 | 21% helix, 35% strand | N9S5K0 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 205 | 0.55 | 0.79 | 37 | MG |
| 2 | 53 | 0.34 | 0.78 | 13 | empty |
Compared structures
- 6K21 · Pyrophosphatase from Acinetobacter baumannii · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt N9S5K0
- Elsewhere: RCSB PDB 6K21 · PDBe 6K21 · UniProt N9S5K0
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.