MolNFT v1 · #154071 · protein

Structural characterization of dnaj from streptococcus pneumonia presents a new tetramer of HSP40 family

6JZB · Chaperone protein dnaj: “Structural characterization of dnaj from streptococcus pneumonia presents a new tetramer of HSP40 family”. X-ray diffraction, 1 ligand (ZN), 1 pocket (best druggability 0.28). MolNFT v1 #154071 on GenesisL1…

PDB: 6JZB
Type: protein
Length: 251 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Chaperone protein dnaj
UniProt: A0MSU1
Ligands: ZN
Pockets: 1 · best druggability 0.28

Structure

x-ray diffraction · 1 distinct chain · 10% helix, 35% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Chaperone protein dnaj	protein	251	10% helix, 35% strand	A0MSU1

Ligands and binding sites

ZN · Zinc ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	68	0.28	0.73	16	empty

Compared structures

6JZB · Structural characterization of DnaJ from Streptococcus pneumonia presents a new tetramer… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0MSU1
Elsewhere: RCSB PDB 6JZB · PDBe 6JZB · UniProt A0MSU1

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