MolNFT v1 · #154026 · protein
SUMO2 bound to phosphorylated SLS4-sim peptide from ICP0
6JXX · Small ubiquitin-related modifier 2: “SUMO2 bound to phosphorylated SLS4-sim peptide from ICP0”. Solution nmr. MolNFT v1 #154026 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6JXX
- Type
- protein
- Length
- 89 residues
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Small ubiquitin-related modifier 2; Phosphorylated SLS4 from E3 ubiquitin ligase ICP0
- UniProt
- P61956
Structure
solution nmr · 2 distinct chains · 13% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Small ubiquitin-related modifier 2 | protein | 77 | 16% helix, 34% strand | P61956 |
| B | Phosphorylated SLS4 from E3 ubiquitin ligase ICP0 | protein | 12 | 0% helix, 50% strand | — |
Interfaces
1 interface between chains.
- A–B · 655 Ų buried · 18 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 modified (phosphorylation).
Compared structures
- 6JXX · SUMO2 bound to phosphorylated SLS4-SIM peptide from ICP0 · the same entry in another collection · chain A against A, TM-score 1.00
- P61956 · AlphaFold monomer V2.0 prediction for small ubiquitin-related modifier 2 (P61956) · a predicted model of the same protein · chain A against A, TM-score 0.93
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P61956
- Elsewhere: RCSB PDB 6JXX · PDBe 6JXX · UniProt P61956
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