MolNFT v1 · #154016 · RNA

Crystal structure of PHI29 prna domain II

6JXM: “Crystal structure of PHI29 prna domain II”. X-ray diffraction, 2 ligands (BA, MG). MolNFT v1 #154016 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6JXM
Type: RNA
Length: 97 nucleotides
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Ligands: BA, MG

Structure

x-ray diffraction · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
B	—	rna	97	—	—

Ligands and binding sites

BA · Barium ion · metal · 15 copies · chains B
MG · Magnesium ion · metal · 7 copies · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6JXM · Crystal Structure of phi29 pRNA domain II · the same entry in another collection · chain B against B, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 6JXM · PDBe 6JXM

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