MolNFT v1 · #153765 · protein

The X-ray crystallographic structure of branching enzyme from rhodothermus obamensis STB05

6JOY · 1,4-alpha-glucan branching enzyme glgb: “The X-ray crystallographic structure of branching enzyme from rhodothermus obamensis STB05”. X-ray diffraction, 5 pockets (best druggability 0.57). MolNFT v1 #153765 on GenesisL1: 3D…

PDB: 6JOY
Type: protein
Length: 621 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: 1,4-alpha-glucan branching enzyme glgb
EC: 2.4.1.18
UniProt: Q93HU3
Pockets: 5 · best druggability 0.57

Structure

x-ray diffraction · 1 distinct chain · 30% helix, 24% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	1,4-alpha-glucan branching enzyme glgb (EC 2.4.1.18)	protein	621	30% helix, 24% strand	Q93HU3

Pockets

5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	154	0.57	0.82	19	empty
2	145	0.50	0.79	19	empty
3	57	0.32	0.76	12	empty
4	62	0.31	0.75	17	empty
5	71	0.30	0.73	18	empty

Compared structures

6JOY · The X-ray Crystallographic Structure of Branching Enzyme from Rhodothermus obamensis STB05 · the same entry in another collection · chain A against A, TM-score 1.00
Q93HU3 · AlphaFold monomer V2.0 prediction for 1,4-alpha-glucan branching enzyme glgb (Q93HU3) · a predicted model of the same protein · chain A against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q93HU3
Elsewhere: RCSB PDB 6JOY · PDBe 6JOY · UniProt Q93HU3

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