MolNFT v1 · #15376 · DNA

Solution structure of 8OG:G mismatch containing duplex

1N2W · 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(8OG)P*GP*CP*G)-3': “Solution structure of 8OG:G mismatch containing duplex”. Solution nmr. MolNFT v1 #15376 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1N2W
Type: DNA
Length: 24 nucleotides
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: 5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(8OG)P*GP*CP*G)-3'

Structure

solution nmr · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	5'-D(CPGPCPGPAPAPTPTP(8OG)PGPCPG)-3'	dna	12	—	—

Interfaces

1 interface between chains.

A–B · 534 Å² buried · 51 hydrogen bonds · nucleic-nucleic

Modifications

Observed in the structure: 2 modified (nucleotide modification).

Compared structures

1N2W · Solution Structure of 8OG:G mismatch containing duplex · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 1N2W · PDBe 1N2W

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