MolNFT v1 · #153638 · DNA
Crystal structure of G-quadruplex formed by bromo-substituted human telomeric DNA
6JKN · DNA (5'-D(*GP*GP*GP*TP*TP*AP*GP*(BGM)…: “Crystal structure of G-quadruplex formed by bromo-substituted human telomeric DNA”. X-ray diffraction, 1 ligand (K). MolNFT v1 #153638 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 6JKN
- Type
- DNA
- Length
- 21 nucleotides
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA (5'-D(*GP*GP*GP*TP*TP*AP*GP*(BGM) P*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*(BGM)P*G)-3')
- Ligands
- K
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA (5'-D(*GP*GP*GP*TP*TP*AP*GP*(BGM) P*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*(BGM)P*G)-3') | dna | 21 | — | — |
Ligands and binding sites
- K · Potassium ion · metal · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 2 modified (nucleotide modification).
Compared structures
- 6JKN · Crystal Structure of G-quadruplex Formed by Bromo-substituted Human Telomeric DNA · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6JKN · PDBe 6JKN
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