MolNFT v1 · #153606 · protein
Crystal structure of peptidyl-tRNA hydrolase from acinetobacter baumannii at 0.99 a resolution.
6JJQ: “Crystal structure of peptidyl-tRNA hydrolase from acinetobacter baumannii at 0.99 a resolution.”. X-ray diffraction, 2 ligands (NA, CL). MolNFT v1 #153606 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6JJQ
- Type
- protein
- Length
- 196 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Peptidyl-tRNA hydrolase
- EC
- 3.1.1.29
- UniProt
- D0C9L6
- Ligands
- NA, CL
Structure
x-ray diffraction · 1 distinct chain · 40% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Peptidyl-tRNA hydrolase (EC 3.1.1.29) | protein | 196 | 40% helix, 21% strand | D0C9L6 |
Ligands and binding sites
- NA · Sodium ion · metal · 2 copies · chains A
- CL · Chloride ion · ion · 3 copies · chains A
- PEG · Di(hydroxyethyl)ether · additive
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6JJQ · Crystal structure of peptidyl-tRNA hydrolase from Acinetobacter baumannii at 0.99 A… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D0C9L6
- Elsewhere: RCSB PDB 6JJQ · PDBe 6JJQ · UniProt D0C9L6
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