MolNFT v1 · #153455 · protein
Covalent labeling of hpparg-lbd by turn-on fluorescent probe mediated by conjugate addition and cyclization
6JF0: “Covalent labeling of hpparg-lbd by turn-on fluorescent probe mediated by conjugate addition and cyclization”. X-ray diffraction, 2 ligands (EB6, EBF). MolNFT v1 #153455 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6JF0
- Type
- protein
- Length
- 503 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P37231
- Ligands
- EB6, EBF
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 257 | — | P37231 |
| B | — | protein | 246 | — | P37231 |
Ligands and binding sites
- EB6 · Methyl (2~{S})-3-[4-[3-(4-methoxy-2-oxidanyl-phenyl) prop-2-ynoyloxy]phenyl]-2-[[2-(phenylcarbonyl) phenyl]amino]propanoate · ligand · chains A
- EBF · 7-methoxychromen-2-one · ligand · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6JF0 · Covalent labeling of hPPARg-LBD by turn-on fluorescent probe mediated by conjugate… · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P37231
- Elsewhere: RCSB PDB 6JF0 · PDBe 6JF0 · UniProt P37231
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