MolNFT v1 · #153453 · protein
Covalent bond formation between ynone moiety of synthetic fatty acid and hpparg-lbd
6JEY: “Covalent bond formation between ynone moiety of synthetic fatty acid and hpparg-lbd”. X-ray diffraction, 1 ligand (EJL). MolNFT v1 #153453 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6JEY
- Type
- protein
- Length
- 503 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P37231
- Ligands
- EJL
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 257 | — | P37231 |
| B | — | protein | 246 | — | P37231 |
Ligands and binding sites
- EJL · (9Z,12Z,15Z,18Z,21Z)-5-oxidanylidenetetracosa-9,12,15, 18,21-pentaen-6-ynoic acid · ligand · 3 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6JEY · Covalent bond formation between y moiety of synthetic fatty acid and hPPARg-LBD · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P37231
- Elsewhere: RCSB PDB 6JEY · PDBe 6JEY · UniProt P37231
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