MolNFT v1 · #153373 · protein
Cryogenic structure of HIV-1 integrase catalytic core domain by synchrotron
6JCF: “Cryogenic structure of HIV-1 integrase catalytic core domain by synchrotron”. X-ray diffraction. MolNFT v1 #153373 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6JCF
- Type
- protein
- Length
- 142 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Integrase
- UniProt
- F2WR52
Structure
x-ray diffraction · 1 distinct chain · 53% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Integrase | protein | 142 | 53% helix, 22% strand | F2WR52 |
Ligands and binding sites
- CAC · Cacodylate ion · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 covalent (additive adduct).
Compared structures
- 6JCF · Cryogenic structure of HIV-1 Integrase catalytic core domain by synchrotron · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt F2WR52
- Elsewhere: RCSB PDB 6JCF · PDBe 6JCF · UniProt F2WR52
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