MolNFT v1 · #153233 · protein

Complex structure of the pseudomonas aeruginosa rhamnosyltransferase earp with the acceptor elongation factor ef-P

6J7M: “Complex structure of the pseudomonas aeruginosa rhamnosyltransferase earp with the acceptor elongation factor…”. X-ray diffraction, 1 ligand (TYD). MolNFT v1 #153233 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6J7M
Type: protein
Length: 1,111 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q9HZZ1, Q9HZZ2
Ligands: TYD

Structure

x-ray diffraction · 3 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, C	—	protein	377	—	Q9HZZ1
M	—	protein	178	—	Q9HZZ2
N	—	protein	179	—	Q9HZZ2

Ligands and binding sites

TYD · Thymidine-5'-diphosphate · ligand · 2 copies · chains A, C
GOL · Glycerol · additive · 2 copies · chains A, M, C, N

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6J7M · Complex structure of the Pseudomonas aeruginosa rhamnosyltransferase EarP with the… · the same entry in another collection · chain N against N, TM-score 1.00
Q9HZZ1 · AlphaFold monomer V2.0 prediction for protein-arginine rhamnosyltransferase (Q9HZZ1) · a predicted model of the same protein · chain A against A, TM-score 0.99
Q9HZZ2 · AlphaFold monomer V2.0 prediction for elongation factor P (Q9HZZ2) · a predicted model of the same protein · chain N against A, TM-score 0.69

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9HZZ1
Every structure of UniProt Q9HZZ2
Elsewhere: RCSB PDB 6J7M · PDBe 6J7M · UniProt Q9HZZ1 · UniProt Q9HZZ2

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