MolNFT v1 · #153129 · protein + DNA

Crystal structure of the ATWRKY2 domain

6J4F: “Crystal structure of the ATWRKY2 domain”. X-ray diffraction, 1 ligand (ZN). MolNFT v1 #153129 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6J4F
Type: protein + DNA
Length: 186 residues
Chains: 6
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q9FG77
Ligands: ZN

Structure

x-ray diffraction · 3 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
B, F	—	protein	63	—	Q9FG77
C, G	—	dna	15	—	—
D, H	—	dna	15	—	—

Ligands and binding sites

ZN · Zinc ion · metal · 2 copies · chains B, F

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6J4F · Crystal structure of the AtWRKY2 domain · the same entry in another collection · chain D against D, TM-score 1.00
Q9FG77 · AlphaFold monomer V2.0 prediction for probable wrky transcription factor 2 (Q9FG77) · a predicted model of the same protein · chain B against A, TM-score 0.85

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9FG77
Elsewhere: RCSB PDB 6J4F · PDBe 6J4F · UniProt Q9FG77

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