MolNFT v1 · #152988 · protein
Crystal structure of haemophilus influenzae bama POTRA3-5
6IZT · Outer membrane protein assembly factor bama: “Crystal structure of haemophilus influenzae bama POTRA3-5”. X-ray diffraction, 2 pockets (best druggability 0.72). MolNFT v1 #152988 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 6IZT
- Type
- protein
- Length
- 508 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Outer membrane protein assembly factor bama
- UniProt
- P46024
- Pockets
- 2 · best druggability 0.72
Structure
x-ray diffraction · 1 distinct chain · 27% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Outer membrane protein assembly factor bama | protein | 254 | 27% helix, 36% strand | P46024 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 824 | 0.72 | 0.77 | 66 | empty |
| 2 | 521 | 0.65 | 0.77 | 50 | empty |
Interfaces
1 interface between chains.
- A–B · 873 Ų buried · 14 hydrogen bonds · protein-protein
Compared structures
- 6IZT · Crystal structure of Haemophilus Influenzae BamA POTRA3-5 · the same entry in another collection · chain A against A, TM-score 1.00
- P46024 · AlphaFold monomer V2.0 prediction for outer membrane protein assembly factor bama (P46024) · a predicted model of the same protein · chain B against A, TM-score 0.89
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P46024
- Elsewhere: RCSB PDB 6IZT · PDBe 6IZT · UniProt P46024
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