MolNFT v1 · #152889 · protein

Structural insight into probable lipid transfer mechanism of non- specific lipid transfer protein via intermediate structures in solanum melongena

6IWP · Non-specific lipid-transfer protein: “Structural insight into probable lipid transfer mechanism of non- specific lipid transfer protein via…”. X-ray diffraction, 1 ligand (MYR), 1 pocket (best druggability 0.81). MolNFT v1 #152889…

PDB: 6IWP
Type: protein
Length: 90 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Non-specific lipid-transfer protein
UniProt: A0A247D6Y2
Ligands: MYR
Pockets: 1 · best druggability 0.81

Structure

x-ray diffraction · 1 distinct chain · 67% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Non-specific lipid-transfer protein	protein	90	67% helix, 0% strand	A0A247D6Y2

Ligands and binding sites

MYR · Myristic acid · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	316	0.81	0.91	36	MYR

Modifications

Observed in the structure: 4 disulfide (disulfide).

Compared structures

6IWP · Structural insight into probable lipid transfer mechanism of non-specific lipid transfer… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A247D6Y2
Elsewhere: RCSB PDB 6IWP · PDBe 6IWP · UniProt A0A247D6Y2

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