MolNFT v1 · #152752 · protein

Crystal structure of staphylococcus aureus response regulator arlr DNA binding domain

6IS4: “Crystal structure of staphylococcus aureus response regulator arlr DNA binding domain”. X-ray diffraction, 2 ligands (MG, NA). MolNFT v1 #152752 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6IS4
Type: protein
Length: 100 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Response regulator arlr
UniProt: Q2YY03
Ligands: MG, NA

Structure

x-ray diffraction · 1 distinct chain · 40% helix, 26% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Response regulator arlr	protein	100	40% helix, 26% strand	Q2YY03

Ligands and binding sites

MG · Magnesium ion · metal · 2 copies · chains A
NA · Sodium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6IS4 · Crystal Structure of Staphylococcus aureus response regulator ArlR DNA binding domain · the same entry in another collection · chain A against A, TM-score 1.00
Q2YY03 · AlphaFold monomer V2.0 prediction for response regulator arlr (Q2YY03) · a predicted model of the same protein · chain A against A, TM-score 0.80

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q2YY03
Elsewhere: RCSB PDB 6IS4 · PDBe 6IS4 · UniProt Q2YY03

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