MolNFT v1 · #152481 · protein
Crystal structure of deacetylase triple mutant (ORF2*T) that involving in teicoplanin biosynthetic pathway
6IIY: “Crystal structure of deacetylase triple mutant (ORF2*T) that involving in teicoplanin biosynthetic pathway”. X-ray diffraction, 1 ligand (CO), 2 pockets (best druggability 0.49). MolNFT v1 #152481 on GenesisL1: 3D structure, binding…
- PDB
- 6IIY
- Type
- protein
- Length
- 237 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Deacetylase
- UniProt
- Q6ZZJ1
- Ligands
- CO
- Pockets
- 2 · best druggability 0.49
Structure
x-ray diffraction · 1 distinct chain · 48% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Deacetylase | protein | 237 | 48% helix, 16% strand | Q6ZZJ1 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 168 | 0.49 | 0.77 | 21 | IMD, CO |
| 2 | 91 | 0.36 | 0.74 | 19 | empty |
Compared structures
- 6IIY · Crystal structure of deacetylase triple mutant (Orf2*T) that involving in teicoplanin… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6ZZJ1
- Elsewhere: RCSB PDB 6IIY · PDBe 6IIY · UniProt Q6ZZJ1
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