MolNFT v1 · #152397 · protein
TRA1 subunit from saccharomyces cerevisiae saga complex
6IG9 · Transcription-associated protein 1: “TRA1 subunit from saccharomyces cerevisiae saga complex”. Electron microscopy, 20 pockets (best druggability 0.80). MolNFT v1 #152397 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6IG9
- Type
- protein
- Length
- 3,386 residues
- Chains
- 1
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Transcription-associated protein 1
- UniProt
- P38811
- Pockets
- 20 · best druggability 0.80
Structure
electron microscopy · 1 distinct chain · 66% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| T | Transcription-associated protein 1 | protein | 3386 | 66% helix, 1% strand | P38811 |
Pockets
20 pockets found on a 1 Å grid, 20 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 812 | 0.80 | 0.83 | 138 | empty |
| 2 | 1016 | 0.79 | 0.81 | 116 | empty |
| 3 | 722 | 0.78 | 0.83 | 130 | empty |
| 4 | 682 | 0.77 | 0.83 | 110 | empty |
| 5 | 853 | 0.76 | 0.80 | 131 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P38811
- Elsewhere: RCSB PDB 6IG9 · PDBe 6IG9 · UniProt P38811
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