MolNFT v1 · #15234 · RNA

Solution structure of a K+ cation stabilized dimeric RNA quadruplex containing two G:G(:A):G:G(:A) hexads, G:G:G:G tetrads and uuuu loops

1MY9 · 5'-R(*GP*GP*AP*GP*GP*UP*UP*UP*UP*GP*GP*AP*GP*G)-3': “Solution structure of a K+ cation stabilized dimeric RNA quadruplex containing two G:G(:A):G:G(:A) hexads…”. Solution nmr. MolNFT v1 #15234 on GenesisL1: 3D structure, binding…

PDB: 1MY9
Type: RNA
Length: 28 nucleotides
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: 5'-R(*GP*GP*AP*GP*GP*UP*UP*UP*UP*GP*GP*AP*GP*G)-3'

Structure

solution nmr · 1 distinct chain.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	5'-R(GPGPAPGPGPUPUPUPUPGPGPAPGPG)-3'	rna	14	—	—

Interfaces

1 interface between chains.

A–B · 549 Å² buried · 53 hydrogen bonds · nucleic-nucleic

Compared structures

1MY9 · Solution structure of a K+ cation stabilized dimeric RNA quadruplex containing two… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 1MY9 · PDBe 1MY9

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