MolNFT v1 · #151916 · RNA
Structure of the RNA duplex containing pseudouridine residue (5'- CP(PSU)PG-3' sequence context)
6I1V · RNA (5'-R(*UP*CP*AP*CP*(PSU)P*GP*AP*GP*U)-3'): “Structure of the RNA duplex containing pseudouridine residue (5'- CP(PSU)PG-3' sequence context)”. Solution nmr. MolNFT v1 #151916 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 6I1V
- Type
- RNA
- Length
- 18 nucleotides
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- RNA (5'-R(*UP*CP*AP*CP*(PSU)P*GP*AP*GP*U)-3'); RNA (5'-R(*AP*CP*UP*CP*AP*GP*UP*GP*A)-3')
Structure
solution nmr · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA (5'-R(*UP*CP*AP*CP*(PSU)P*GP*AP*GP*U)-3') | rna | 9 | — | — |
| B | RNA (5'-R(*AP*CP*UP*CP*AP*GP*UP*GP*A)-3') | rna | 9 | — | — |
Interfaces
1 interface between chains.
- A–B · 428 Ų buried · 43 hydrogen bonds · nucleic-nucleic
Modifications
Observed in the structure: 1 modified (nucleotide modification).
Compared structures
- 6I1V · Structure of the RNA duplex containing pseudouridine residue (5'-Cp(PSU)pG-3' sequence… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6I1V · PDBe 6I1V
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