MolNFT v1 · #151859 · protein

Crystal structure of psychrophilic phosphoglycerate kinase from pseudomonas TACII18

6I06: “Crystal structure of psychrophilic phosphoglycerate kinase from pseudomonas TACII18”. X-ray diffraction, 2 pockets (best druggability 0.47). MolNFT v1 #151859 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6I06
Type: protein
Length: 386 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Phosphoglycerate kinase
EC: 2.7.2.3
UniProt: Q9RBS3
Pockets: 2 · best druggability 0.47

Structure

x-ray diffraction · 1 distinct chain · 42% helix, 18% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Phosphoglycerate kinase (EC 2.7.2.3)	protein	386	42% helix, 18% strand	Q9RBS3

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	75	0.47	0.82	18	empty
2	133	0.46	0.78	31	empty

Compared structures

6I06 · Crystal structure of psychrophilic phosphoglycerate kinase from Pseudomonas TACII18 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9RBS3
Elsewhere: RCSB PDB 6I06 · PDBe 6I06 · UniProt Q9RBS3

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