MolNFT v1 · #151610 · protein

Two-phospholipid-bound crystal structure of the substrate-binding protein TTG2D from pseudomonas aeruginosa

6HSY · Toluene tolerance protein TTG2D: “Two-phospholipid-bound crystal structure of the substrate-binding protein TTG2D from pseudomonas aeruginosa”. X-ray diffraction, 3 ligands (GOT, H3T, SO4), 1 pocket (best druggability 0.81). MolNFT…

PDB: 6HSY
Type: protein
Length: 190 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Toluene tolerance protein TTG2D
UniProt: Q9HVW4
Ligands: GOT, H3T, SO4
Pockets: 1 · best druggability 0.81

Structure

x-ray diffraction · 1 distinct chain · 60% helix, 20% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Toluene tolerance protein TTG2D	protein	190	60% helix, 20% strand	Q9HVW4

Ligands and binding sites

GOT · Phospholipid PG(16:0/cy17:0) · ligand · chains A
H3T · Phospholipid PG(16:0/cy17:0) · ligand · chains A
SO4 · Sulfate ion · ion · 3 copies · chains A
GOL · Glycerol · additive · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1122	0.81	0.81	62	GOT, H3T

Compared structures

6HSY · Two-phospholipid-bound crystal structure of the substrate-binding protein Ttg2D from… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9HVW4
Elsewhere: RCSB PDB 6HSY · PDBe 6HSY · UniProt Q9HVW4

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