MolNFT v1 · #15148 · protein
Structural studies of the retroviral proteinase from avian myeloblastosis associated virus
1MVP · Myeloblastosis associated viral protease: “Structural studies of the retroviral proteinase from avian myeloblastosis associated virus”. X-ray diffraction, 1 pocket (best druggability 0.35). MolNFT v1 #15148 on GenesisL1: 3D…
- PDB
- 1MVP
- Type
- protein
- Length
- 223 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Myeloblastosis associated viral protease
- EC
- 3.4.23.-
- UniProt
- P26315
- Pockets
- 1 · best druggability 0.35
Structure
x-ray diffraction · 2 distinct chains · 5% helix, 42% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Myeloblastosis associated viral protease (EC 3.4.23.-) | protein | 112 | 5% helix, 42% strand | P26315 |
| B | Myeloblastosis associated viral protease (EC 3.4.23.-) | protein | 111 | 5% helix, 42% strand | P26315 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 108 | 0.35 | 0.73 | 21 | empty |
Interfaces
1 interface between chains.
- A–B · 1513 Ų buried · 50 hydrogen bonds · protein-protein
Compared structures
- 1MVP · Structural studies of the retroviral proteinase from avian myeloblastosis associated virus · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P26315
- Elsewhere: RCSB PDB 1MVP · PDBe 1MVP · UniProt P26315
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