MolNFT v1 · #151429 · protein

The ligand-free, open structure of CD0873, a substrate binding protein with adhesive properties from clostridium difficile.

6HNK · ABC-type transport system, sugar-family extracellular…: “The ligand-free, open structure of CD0873, a substrate binding protein with adhesive properties from…”. X-ray diffraction, 1 pocket (best druggability 0.51). MolNFT v1 #151429…

PDB: 6HNK
Type: protein
Length: 295 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: ABC-type transport system, sugar-family extracellular solute-binding protein
UniProt: Q18A65
Pockets: 1 · best druggability 0.51

Structure

x-ray diffraction · 1 distinct chain · 41% helix, 22% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	ABC-type transport system, sugar-family extracellular solute-binding protein	protein	295	41% helix, 22% strand	Q18A65

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	266	0.51	0.75	38	empty

Compared structures

6HNK · The ligand-free, open structure of CD0873, a substrate binding protein with adhesive… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q18A65
Elsewhere: RCSB PDB 6HNK · PDBe 6HNK · UniProt Q18A65

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