MolNFT v1 · #151392 · RNA
Solution structure of the RNA duplex formed by the 5'-end of U1SNRNA and the 5'-splice site of SMN2 EXON7
6HMI · RNA (5'-R(*AP*UP*AP*CP*(PSU)P*(PSU)P*AP*CP*CP*UP*G)-3'): “Solution structure of the RNA duplex formed by the 5'-end of U1SNRNA and the 5'-splice site of SMN2 EXON7”. Solution nmr. MolNFT v1 #151392 on GenesisL1: 3D structure…
- PDB
- 6HMI
- Type
- RNA
- Length
- 22 nucleotides
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- RNA (5'-R(*AP*UP*AP*CP*(PSU)P*(PSU)P*AP*CP*CP*UP*G)-3'); RNA…
Structure
solution nmr · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA (5'-R(*AP*UP*AP*CP*(PSU)P*(PSU)P*AP*CP*CP*UP*G)-3') | rna | 11 | — | — |
| B | RNA (5'-R(*GP*GP*AP*GP*UP*AP*AP*GP*UP*CP*U)-3') | rna | 11 | — | — |
Interfaces
1 interface between chains.
- A–B · 519 Ų buried · 45 hydrogen bonds · nucleic-nucleic
Modifications
Observed in the structure: 2 modified (nucleotide modification).
Compared structures
- 6HMI · Solution structure of the RNA duplex formed by the 5'-end of U1snRNA and the 5'-splice… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6HMI · PDBe 6HMI
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