MolNFT v1 · #15138 · protein
Maze addiction antidote
1MVF · Immunoglobulin heavy chain variable region: “Maze addiction antidote”. X-ray diffraction. MolNFT v1 #15138 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1MVF
- Type
- protein
- Length
- 335 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Immunoglobulin heavy chain variable region; Pemi-like protein 1
- UniProt
- P18534
Structure
x-ray diffraction · 3 distinct chains · 7% helix, 50% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Immunoglobulin heavy chain variable region | protein | 126 | 7% helix, 52% strand | — |
| B | Immunoglobulin heavy chain variable region | protein | 121 | 5% helix, 48% strand | — |
| D, E | Pemi-like protein 1 | protein | 44 | 14% helix, 50% strand | P18534 |
Interfaces
5 interfaces between chains.
- D–E · 1728 Ų buried · 16 hydrogen bonds · protein-protein
- A–E · 403 Ų buried · 12 hydrogen bonds · protein-protein
- B–D · 395 Ų buried · 12 hydrogen bonds · protein-protein
- A–D · 238 Ų buried · 4 hydrogen bonds · protein-protein
- B–E · 228 Ų buried · 5 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 1MVF · MazE addiction antidote · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P18534
- Elsewhere: RCSB PDB 1MVF · PDBe 1MVF · UniProt P18534
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