MolNFT v1 · #15127 · RNA
The tandem, face-to-face ap pairs in 5'(RGGCAPGCCU)2
1MV2 · 5'-R(*GP*GP*CP*AP*(P5P)P*GP*CP*CP*U)-3': “The tandem, face-to-face ap pairs in 5'(RGGCAPGCCU)2”. Solution nmr. MolNFT v1 #15127 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1MV2
- Type
- RNA
- Length
- 18 nucleotides
- Chains
- 2
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 5'-R(*GP*GP*CP*AP*(P5P)P*GP*CP*CP*U)-3'
Structure
solution nmr · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | 5'-R(*GP*GP*CP*AP*(P5P)P*GP*CP*CP*U)-3' | rna | 9 | — | — |
Interfaces
1 interface between chains.
- A–B · 418 Ų buried · 39 hydrogen bonds · nucleic-nucleic
Modifications
Observed in the structure: 2 modified (nucleotide modification).
Compared structures
- 1MV2 · The tandem, Face-to-Face AP Pairs in 5'(rGGCAPGCCU)2 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1MV2 · PDBe 1MV2
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