MolNFT v1 · #150668 · RNA
X-ray structure of SRS2 fragment of RGS4 3' utr
6H0R · SRS2 fragment of RGS4 3' utr, RNA (31-mer): “X-ray structure of SRS2 fragment of RGS4 3' utr”. X-ray diffraction, 2 ligands (BA, MG), 2 pockets (best druggability 0.64). MolNFT v1 #150668 on GenesisL1: 3D structure, binding sites…
- PDB
- 6H0R
- Type
- RNA
- Length
- 62 nucleotides
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- SRS2 fragment of RGS4 3' utr, RNA (31-mer)
- Ligands
- BA, MG
- Pockets
- 2 · best druggability 0.64
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | SRS2 fragment of RGS4 3' utr, RNA (31-mer) | rna | 31 | — | — |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 601 | 0.64 | 0.76 | 29 | BA, MG |
| 2 | 593 | 0.61 | 0.75 | 29 | BA |
Interfaces
1 interface between chains.
- A–B · 232 Ų buried · 21 hydrogen bonds · nucleic-nucleic
Compared structures
- 6H0R · X-ray structure of SRS2 fragment of Rgs4 3' UTR · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6H0R · PDBe 6H0R
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