MolNFT v1 · #150640 · protein
Identification of a druggable VP1-VP3 interprotomer pocket in the capsid of enteroviruses
6GZV: “Identification of a druggable VP1-VP3 interprotomer pocket in the capsid of enteroviruses”. Electron microscopy, 1 ligand (FHK). MolNFT v1 #150640 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6GZV
- Type
- protein
- Length
- 818 residues
- Chains
- 4
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P03313
- Ligands
- FHK
Structure
electron microscopy · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 269 | — | P03313 |
| B | — | protein | 255 | — | P03313 |
| C | — | protein | 238 | — | P03313 |
| D | — | protein | 56 | — | P03313 |
Ligands and binding sites
- FHK · 4-[[4-[1,3-bis(oxidanylidene)isoindol-2-yl]phenyl]sulfonylamino]benzoic acid · ligand · chains A, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6GZV · Identification of a druggable VP1-VP3 interprotomer pocket in the capsid of enteroviruses · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03313
- Elsewhere: RCSB PDB 6GZV · PDBe 6GZV · UniProt P03313
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