MolNFT v1 · #150622 · protein
Structure of murine leukemia virus capsid C-terminal domain
6GZA · Capsid protein: “Structure of murine leukemia virus capsid C-terminal domain”. X-ray diffraction, 1 ligand (CO). MolNFT v1 #150622 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6GZA
- Type
- protein
- Length
- 174 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Capsid protein
- UniProt
- A0A220A2R8
- Ligands
- CO
Structure
x-ray diffraction · 1 distinct chain · 67% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Capsid protein | protein | 87 | 67% helix, 0% strand | A0A220A2R8 |
Ligands and binding sites
- CO · Cobalt (II) ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 1101 Ų buried · 5 hydrogen bonds · protein-protein
Compared structures
- 6GZA · Structure of murine leukemia virus capsid C-terminal domain · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A220A2R8
- Elsewhere: RCSB PDB 6GZA · PDBe 6GZA · UniProt A0A220A2R8
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