MolNFT v1 · #150611 · protein

Crystal structure of daca from staphylococcus aureus

6GYW · Diadenylate cyclase: “Crystal structure of daca from staphylococcus aureus”. X-ray diffraction, 1 pocket (best druggability 0.30). MolNFT v1 #150611 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6GYW
Type: protein
Length: 301 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Diadenylate cyclase
EC: 2.7.7.85
UniProt: A0A2P7CAT2
Pockets: 1 · best druggability 0.30

Structure

x-ray diffraction · 2 distinct chains · 37% helix, 24% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Diadenylate cyclase (EC 2.7.7.85)	protein	150	37% helix, 24% strand	A0A2P7CAT2
B	Diadenylate cyclase (EC 2.7.7.85)	protein	151	36% helix, 24% strand	A0A2P7CAT2

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	59	0.30	0.75	13	empty

Interfaces

1 interface between chains.

A–B · 755 Å² buried · 17 hydrogen bonds · protein-protein

Compared structures

6GYW · Crystal structure of DacA from Staphylococcus aureus · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A2P7CAT2
Elsewhere: RCSB PDB 6GYW · PDBe 6GYW · UniProt A0A2P7CAT2

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