MolNFT v1 · #150520 · protein
GII.10 human norovirus protruding domain in complex with glycochenodeoxycholate (gcdca)
6GW1: “GII.10 human norovirus protruding domain in complex with glycochenodeoxycholate (gcdca)”. X-ray diffraction, 2 ligands (CHO, NA). MolNFT v1 #150520 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6GW1
- Type
- protein
- Length
- 619 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q5F4T5
- Ligands
- CHO, NA
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 309 | — | Q5F4T5 |
| B | — | protein | 310 | — | Q5F4T5 |
Ligands and binding sites
- CHO · Glycochenodeoxycholic acid · ligand · 2 copies · chains A, B
- NA · Sodium ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6GW1 · GII.10 human norovirus protruding domain in complex with glycochenodeoxycholate (GCDCA) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5F4T5
- Elsewhere: RCSB PDB 6GW1 · PDBe 6GW1 · UniProt Q5F4T5
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